PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462867419
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family HB-other
Protein Properties Length: 1237aa    MW: 135071 Da    PI: 5.5034
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462867419genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.13.1e-182986457
               -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
   Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  462867419 29 YVRYTPEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 86
               6789****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.4352387IPR001356Homeobox domain
SMARTSM003892.6E-152591IPR001356Homeobox domain
SuperFamilySSF466891.11E-162790IPR009057Homeodomain-like
CDDcd000865.19E-162888No hitNo description
PfamPF000468.0E-162986IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.1E-183086IPR009057Homeodomain-like
CDDcd146862.84E-680119No hitNo description
PfamPF086701.5E-26467563IPR013978MEKHLA
PfamPF086702.1E-23566644IPR013978MEKHLA
PfamPF086702.6E-4810561198IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1237 aa     Download sequence    Send to blast
MAAMVAVGGG KDRSSPGGGG APQVDTGKYV RYTPEQVEAL ERVYSECPKP SSLRRQQLIR  60
ECPILSNIEP KQIKVWFQNR RCREKQRKEA SRLQTVNRKL TAMNKLLMEE NDRLQKQVSR  120
LVYENGYMRQ QLHNPSVATT DTSCESVVTS GQHRQQQNPA APRPQRDANN PAGEHRSEWA  180
DPGVDAYSAA ALRASPYAVP GLRASGFMGS QVILPLAHTL EHEEFLEVIR LEGHSLCHDE  240
VVLSRDMYLL QLCSGVDENA AGACAQLVFA PIDESFADDA PLLPSGFRVI PLDAKTFLEV  300
IRLEGHSLCH DEVVLSRDMY LLQLCSGVDE NAAGACAQLV FAPIDESFAD DAPLLPSGFR  360
VIPLDAKTDP PSGTRTLDLA STLEVGSGGT TRASSDASNA SNTRSVLTIA FQFSYENHLR  420
ESVAAMARQY VRTVVASVQR VAMAIAPSRL GGQLEMKQTP GSPEAQTLAR WIGRSYRFHT  480
GAELLRTETQ CTDSSLKALW QHSDSIMCCS LKAAPVFTFA NQAGLDMLET TLIALQDISL  540
EKILDDDGRK ALCTEYPKIM QQAALVFTFA NQAGLDMLET TLIALQDISL EKILDDDGRK  600
ALCTEYPKIM KQGFAYLPGG VCVSSMGRPV SYEQAVAWKV LSDDCLLAIA EENLAEFLSK  660
ATGTAVDWVQ MVGMKPGPDS IGIIAISHNC SVAETFKDCP SWYRDCRCVD VLHVIPTGNG  720
GTIELIYMQI CERLLTKLTG GPSGPITPNF VGAKVLPSRY ALRHIRQTVH ESSGEMPYGG  780
GRQPAVLRTF NVVNGFPDDG WLLMSSDGAE DVTIAINSFP NKLVGSHENS SQLFSAIGGG  840
ILCAKASMLL QNVTPALLVR FLREHRSEWA DPGVDAYSAA ALRASPYAVP GLLASGFMGS  900
QVILPLALTL EHEEFLEVIR LEGHSLCHDE VVLSRDMYLL QLCSGVDENA AGACTQLDPP  960
SGTHTLDLAS TLEVGSGGTT RASSDAANAS NTRSVLTIAF QFSYENHLRE SVAAMARQYV  1020
RTVVASVQRV AMAIAPSRLG GQLEMKQTPG SPEAQTLARW IGRSYRFHTG AELLRTETQC  1080
TDSSLKALWQ HSDSIMCCSL KAALVFTFAN QAGLDMLETT LIALQDISLE KILDDDGRKA  1140
LCTEYPKIMR QGFAYLPGGV CVSSMGRPVS YEQAVAWKVL SDDDTPHCLA FMFVNWSFVI  1200
YDERPPSLRL NWILDRIIRV VLALSEVACR NPNAFWM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004982339.10.0PREDICTED: homeobox-leucine zipper protein HOX32
SwissprotQ6AST10.0HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBLK4A5S40.0K4A5S4_SETIT; Uncharacterized protein
STRINGSi034228m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37438197
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein